Human

Human Kidney Gene DataBase

Name tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory)
Symbol TIMP3
Aliases SFD; K222TA2; HSMRK222; K222 expressed in degenerative retinas; Tissue inhibitor of metalloproteinase-3
Gene Product
  • tissue inhibitor of metalloproteinase 3
Category
UniGene Hs.245188 
Reference Sequence
mRNA: NM_000362 Protein: NP_000353
OMIM and SNP
OMIM: 188826 SNP: NCBI SNP
Locus
LocusLink: 7078Chromosome: 22Cytoband: 22q12.1-q13.2 UCSC Genome Map Eesembl Genome Map
SummaryThis gene belongs to the TIMP gene family. The proteins encoded by this gene family are natural inhibitors of the matrix metalloproteinases, a group of peptidases involved in degradation of the extracellular matrix. The expression of this gene is induced in response to mitogenic stimulation and subject to cell cycle regulation. Mutations in this gene cause the autosomal dominant disorder Sorsby's fundus dystrophy.
Gene Ontology
Expression
EST (1336 ESTs, 312 libraries)
Tissue Breadth ? CPM ?
adiposeBreadth of expression: 1 out of  8 libraries express this gene (12.50%)Average CPM:0.83
boneBreadth of expression: 10 out of  24 libraries express this gene (41.67%)Average CPM:3.54
brainBreadth of expression: 25 out of  759 libraries express this gene (3.29%)Average CPM:0.12
cartilageBreadth of expression: 9 out of  16 libraries express this gene (56.25%)Average CPM:0.43
cervixBreadth of expression: 2 out of  11 libraries express this gene (18.18%)Average CPM:0.39
colonBreadth of expression: 13 out of  930 libraries express this gene (1.40%)Average CPM:249.50
earBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:1.14
embryoBreadth of expression: 1 out of  4 libraries express this gene (25.00%)Average CPM:0.41
esophagusBreadth of expression: 1 out of  8 libraries express this gene (12.50%)Average CPM:0.27
eyeBreadth of expression: 5 out of  24 libraries express this gene (20.83%)Average CPM:1.03
germ cellBreadth of expression: 4 out of  6 libraries express this gene (66.67%)Average CPM:1.41
head and neckBreadth of expression: 7 out of  680 libraries express this gene (1.03%)Average CPM:11.88
heartBreadth of expression: 3 out of  26 libraries express this gene (11.54%)Average CPM:1.74
kidneyBreadth of expression: 9 out of  145 libraries express this gene (6.21%)Average CPM:0.15
liverBreadth of expression: 9 out of  65 libraries express this gene (13.85%)Average CPM:0.66
lungBreadth of expression: 25 out of  334 libraries express this gene (7.49%)Average CPM:0.42
mammary glandBreadth of expression: 9 out of  1038 libraries express this gene (0.87%)Average CPM:1.46
muscleBreadth of expression: 7 out of  83 libraries express this gene (8.43%)Average CPM:0.07
nervousBreadth of expression: 8 out of  21 libraries express this gene (38.10%)Average CPM:1.12
oral cavityBreadth of expression: 1 out of  13 libraries express this gene (7.69%)Average CPM:0.77
ovaryBreadth of expression: 5 out of  170 libraries express this gene (2.94%)Average CPM:0.15
pancreasBreadth of expression: 3 out of  20 libraries express this gene (15.00%)Average CPM:0.12
parathyroidBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:0.43
placentaBreadth of expression: 37 out of  358 libraries express this gene (10.34%)Average CPM:4.18
prostateBreadth of expression: 7 out of  309 libraries express this gene (2.27%)Average CPM:0.91
skinBreadth of expression: 9 out of  38 libraries express this gene (23.68%)Average CPM:0.22
spleenBreadth of expression: 1 out of  15 libraries express this gene (6.67%)Average CPM:0.75
stomachBreadth of expression: 3 out of  310 libraries express this gene (0.97%)Average CPM:2.42
testisBreadth of expression: 6 out of  180 libraries express this gene (3.33%)Average CPM:0.51
thymusBreadth of expression: 1 out of  23 libraries express this gene (4.35%)Average CPM:0.24
thyroidBreadth of expression: 2 out of  48 libraries express this gene (4.17%)Average CPM:3.27
uncharacterized tissueBreadth of expression: 59 out of  1739 libraries express this gene (3.39%)Average CPM:0.06
uterusBreadth of expression: 11 out of  236 libraries express this gene (4.66%)Average CPM:0.11
vascularBreadth of expression: 1 out of  18 libraries express this gene (5.56%)Average CPM:0.30
whole bodyBreadth of expression: 4 out of  12 libraries express this gene (33.33%)Average CPM:0.30
SAGE (29819663 tags, 549 libraries)
Tissue Breadth ? CPM ?
brainBreadth of expression: 30 out of  30 libraries express this gene (100.00%)Average CPM:213.66
cerebellumBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:58.50
cervixBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:361.63
colonBreadth of expression: 7 out of  8 libraries express this gene (87.50%)Average CPM:88.16
eyeBreadth of expression: 6 out of  6 libraries express this gene (100.00%)Average CPM:152.62
foreskinBreadth of expression: 2 out of  2 libraries express this gene (100.00%)Average CPM:1088.65
heartBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:604.57
kidneyBreadth of expression: 3 out of  3 libraries express this gene (100.00%)Average CPM:129.44
liverBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:89.74
lungBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:807.69
mammary glandBreadth of expression: 13 out of  20 libraries express this gene (65.00%)Average CPM:170.44
mesothelial tissueBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:397.94
muscleBreadth of expression: 2 out of  2 libraries express this gene (100.00%)Average CPM:120.68
nervousBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:360.87
ovaryBreadth of expression: 9 out of  10 libraries express this gene (90.00%)Average CPM:236.48
pancreasBreadth of expression: 4 out of  8 libraries express this gene (50.00%)Average CPM:575.83
prostateBreadth of expression: 10 out of  14 libraries express this gene (71.43%)Average CPM:156.98
skinBreadth of expression: 3 out of  7 libraries express this gene (42.86%)Average CPM:170.93
stomachBreadth of expression: 4 out of  4 libraries express this gene (100.00%)Average CPM:313.25
uncharacterized tissueBreadth of expression: 18 out of  20 libraries express this gene (90.00%)Average CPM:279.12
vascularBreadth of expression: 3 out of  3 libraries express this gene (100.00%)Average CPM:150.37
EvidenceCpG Methylation in Kidney Neoplasms

Other key publications related to this gene


© 2004, KGDB, All Rights Reserved.
Department of Urology
University of California, San Francisco