Human

Human Kidney Gene DataBase

Name eyes absent homolog 1 (Drosophila)
Symbol EYA1
Aliases BOP; BOR; Melnick-Fraser syndrome; Eyes absent, Drosophila, homolog of, 1
Gene Product
  • eyes absent 1 isoform c
  • eyes absent 1 isoform b
  • eyes absent 1 isoform a
Category
UniGene Hs.94210 
Reference Sequence
mRNA: NM_172060 Protein: NP_742057
OMIM and SNP
OMIM: 601653 SNP: NCBI SNP
Locus
LocusLink: 2138Chromosome: 8Cytoband: 8q13.3 UCSC Genome Map Eesembl Genome Map
SummaryThis gene encodes a member of the eyes absent (EYA) family of proteins. The encoded protein may play a role in the developing kidney, branchial arches, eye, and ear. Mutations of this gene have been associated with branchiootorenal dysplasia syndrome, branchiootic syndrome, and sporadic cases of congenital cataracts and ocular anterior segment anomalies. A similar protein in mice can act as a transcriptional activator. Four transcript variants encoding three distinct isoforms have been identified for this gene.
Gene Ontology
Expression
EST (37 ESTs, 22 libraries)
Tissue Breadth ? CPM ?
brainBreadth of expression: 3 out of  759 libraries express this gene (0.40%)Average CPM:48.52
cartilageBreadth of expression: 1 out of  16 libraries express this gene (6.25%)Average CPM:6.22
earBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:10.82
heartBreadth of expression: 1 out of  26 libraries express this gene (3.85%)Average CPM:26.42
kidneyBreadth of expression: 1 out of  145 libraries express this gene (0.69%)Average CPM:14.41
lungBreadth of expression: 3 out of  334 libraries express this gene (0.90%)Average CPM:1.86
nervousBreadth of expression: 2 out of  21 libraries express this gene (9.52%)Average CPM:12.24
oral cavityBreadth of expression: 1 out of  13 libraries express this gene (7.69%)Average CPM:83.68
skinBreadth of expression: 1 out of  38 libraries express this gene (2.63%)Average CPM:0.71
testisBreadth of expression: 2 out of  180 libraries express this gene (1.11%)Average CPM:1.88
uncharacterized tissueBreadth of expression: 3 out of  1739 libraries express this gene (0.17%)Average CPM:11.19
SAGE (2357382 tags, 47 libraries)
Tissue Breadth ? CPM ?
brainBreadth of expression: 9 out of  30 libraries express this gene (30.00%)Average CPM:25.38
cerebellumBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:19.50
cervixBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:65.75
colonBreadth of expression: 1 out of  8 libraries express this gene (12.50%)Average CPM:40.76
eyeBreadth of expression: 1 out of  6 libraries express this gene (16.67%)Average CPM:101.27
foreskinBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:105.30
heartBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:11.85
lungBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:33.65
mammary glandBreadth of expression: 2 out of  20 libraries express this gene (10.00%)Average CPM:32.08
muscleBreadth of expression: 2 out of  2 libraries express this gene (100.00%)Average CPM:18.57
nervousBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:18.04
ovaryBreadth of expression: 4 out of  10 libraries express this gene (40.00%)Average CPM:29.67
pancreasBreadth of expression: 3 out of  8 libraries express this gene (37.50%)Average CPM:48.97
prostateBreadth of expression: 3 out of  14 libraries express this gene (21.43%)Average CPM:17.97
skinBreadth of expression: 1 out of  7 libraries express this gene (14.29%)Average CPM:65.93
stomachBreadth of expression: 2 out of  4 libraries express this gene (50.00%)Average CPM:22.24
uncharacterized tissueBreadth of expression: 5 out of  20 libraries express this gene (25.00%)Average CPM:25.06
vascularBreadth of expression: 2 out of  3 libraries express this gene (66.67%)Average CPM:80.43
EvidenceDeletion in System Syndrom with Kidney Involvment Mutation in System Syndrom with Kidney Involvment

Other key publications related to this gene


© 2004, KGDB, All Rights Reserved.
Department of Urology
University of California, San Francisco