Human

Human Kidney Gene DataBase

Name oculocerebrorenal syndrome of Lowe
Symbol OCRL
Aliases LOCR; OCRL1; INPP5F
Gene Product
  • phosphatidylinositol polyphosphate 5-phosphatase isoform a
  • phosphatidylinositol polyphosphate 5-phosphotase isoform b
Category
UniGene Hs.126357 
Reference Sequence
mRNA: NM_001587 Protein: NP_001578
OMIM and SNP
OMIM: 309000 SNP: NCBI SNP
Locus
LocusLink: 4952Chromosome: XCytoband: Xq25-q26.1 UCSC Genome Map Eesembl Genome Map
SummaryMutations linked to the disease oculocerebrorenal syndrome of Lowe led to the identification of the OCRL gene. The encoded protein is a phospatidylinositol polyphosphate 5-phosphatase that is found in golgi cisternae.
Expression
EST (212 ESTs, 106 libraries)
Tissue Breadth ? CPM ?
boneBreadth of expression: 2 out of  24 libraries express this gene (8.33%)Average CPM:0.93
brainBreadth of expression: 10 out of  759 libraries express this gene (1.32%)Average CPM:1.17
cartilageBreadth of expression: 2 out of  16 libraries express this gene (12.50%)Average CPM:0.93
cervixBreadth of expression: 1 out of  11 libraries express this gene (9.09%)Average CPM:4.48
colonBreadth of expression: 7 out of  930 libraries express this gene (0.75%)Average CPM:7.32
embryoBreadth of expression: 2 out of  4 libraries express this gene (50.00%)Average CPM:1.73
eyeBreadth of expression: 4 out of  24 libraries express this gene (16.67%)Average CPM:1.46
germ cellBreadth of expression: 1 out of  6 libraries express this gene (16.67%)Average CPM:0.26
head and neckBreadth of expression: 2 out of  680 libraries express this gene (0.29%)Average CPM:22.04
kidneyBreadth of expression: 4 out of  145 libraries express this gene (2.76%)Average CPM:0.38
liverBreadth of expression: 2 out of  65 libraries express this gene (3.08%)Average CPM:0.32
lungBreadth of expression: 10 out of  334 libraries express this gene (2.99%)Average CPM:0.55
lymph nodeBreadth of expression: 1 out of  22 libraries express this gene (4.55%)Average CPM:0.22
mammary glandBreadth of expression: 4 out of  1038 libraries express this gene (0.39%)Average CPM:0.74
muscleBreadth of expression: 2 out of  83 libraries express this gene (2.41%)Average CPM:1.76
nervousBreadth of expression: 4 out of  21 libraries express this gene (19.05%)Average CPM:1.42
ovaryBreadth of expression: 2 out of  170 libraries express this gene (1.18%)Average CPM:0.94
pancreasBreadth of expression: 2 out of  20 libraries express this gene (10.00%)Average CPM:0.32
parathyroidBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:0.45
placentaBreadth of expression: 3 out of  358 libraries express this gene (0.84%)Average CPM:0.30
prostateBreadth of expression: 4 out of  309 libraries express this gene (1.29%)Average CPM:0.51
skinBreadth of expression: 2 out of  38 libraries express this gene (5.26%)Average CPM:0.38
stomachBreadth of expression: 4 out of  310 libraries express this gene (1.29%)Average CPM:0.27
testisBreadth of expression: 4 out of  180 libraries express this gene (2.22%)Average CPM:0.25
uncharacterized tissueBreadth of expression: 15 out of  1739 libraries express this gene (0.86%)Average CPM:0.64
uterusBreadth of expression: 4 out of  236 libraries express this gene (1.69%)Average CPM:0.35
vascularBreadth of expression: 1 out of  18 libraries express this gene (5.56%)Average CPM:0.94
whole bodyBreadth of expression: 1 out of  12 libraries express this gene (8.33%)Average CPM:0.19
SAGE (543632 tags, 12 libraries)
Tissue Breadth ? CPM ?
brainBreadth of expression: 2 out of  30 libraries express this gene (6.67%)Average CPM:23.24
mammary glandBreadth of expression: 3 out of  20 libraries express this gene (15.00%)Average CPM:82.66
nervousBreadth of expression: 1 out of  1 libraries express this gene (100.00%)Average CPM:18.04
prostateBreadth of expression: 1 out of  14 libraries express this gene (7.14%)Average CPM:24.02
uncharacterized tissueBreadth of expression: 5 out of  20 libraries express this gene (25.00%)Average CPM:25.45
EvidenceDeletion in Kidney Neoplasms Deletion in System Syndrom with Kidney Involvment Mutation in System Syndrom with Kidney Involvment

Other key publications related to this gene


© 2004, KGDB, All Rights Reserved.
Department of Urology
University of California, San Francisco