Human

Human Kidney Gene DataBase

Name GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome)
Symbol GLI3
Aliases PHS; GCPS; PAPA; PAPB; PAP-A; PAPA1; PPDIV; oncogene GLI3; DNA-binding protein; zinc finger protein GLI3
Gene Product
  • GLI-Kruppel family member GLI3
Category
UniGene Hs.72916 
Reference Sequence
mRNA: NM_000168 Protein: NP_000159
OMIM and SNP
OMIM: 165240 SNP: NCBI SNP
Locus
LocusLink: 2737Chromosome: 7Cytoband: 7p13 UCSC Genome Map Eesembl Genome Map
SummaryThis gene encodes a protein which belongs to the C2H2-type zinc finger proteins subclass of the Gli family. They are characterized as a transcription factor that binds to DNA through zinc finger motifs. These motifs have conserved H-C links. Gli family zinc finger proteins are mediators of Sonic hedgehog (Shh) signaling. The protein encoded by this gene localizes in the cytoplasm and activates patched Drosophila homolog (PTCH) gene expression. It is also thought to play a role during embryogenesis. The encoded protein is associated with several phenotypes- Greig cephalopolysyndactyly syndrome, Pallister-Hall syndrome, preaxial polydactyly type IV, postaxial polydactyly types A1 and B.
Gene Ontology
Expression
EST (66 ESTs, 47 libraries)
Tissue Breadth ? CPM ?
adiposeBreadth of expression: 1 out of  8 libraries express this gene (12.50%)Average CPM:1.87
bloodBreadth of expression: 1 out of  32 libraries express this gene (3.12%)Average CPM:16.67
boneBreadth of expression: 3 out of  24 libraries express this gene (12.50%)Average CPM:4.09
brainBreadth of expression: 8 out of  759 libraries express this gene (1.05%)Average CPM:34.99
cartilageBreadth of expression: 2 out of  16 libraries express this gene (12.50%)Average CPM:4.73
embryoBreadth of expression: 1 out of  4 libraries express this gene (25.00%)Average CPM:15.36
head and neckBreadth of expression: 2 out of  680 libraries express this gene (0.29%)Average CPM:233.10
heartBreadth of expression: 1 out of  26 libraries express this gene (3.85%)Average CPM:0.41
kidneyBreadth of expression: 2 out of  145 libraries express this gene (1.38%)Average CPM:4.04
lungBreadth of expression: 4 out of  334 libraries express this gene (1.20%)Average CPM:1.74
mammary glandBreadth of expression: 2 out of  1038 libraries express this gene (0.19%)Average CPM:144.30
muscleBreadth of expression: 2 out of  83 libraries express this gene (2.41%)Average CPM:25.62
nervousBreadth of expression: 2 out of  21 libraries express this gene (9.52%)Average CPM:13.77
oral cavityBreadth of expression: 1 out of  13 libraries express this gene (7.69%)Average CPM:1.47
ovaryBreadth of expression: 1 out of  170 libraries express this gene (0.59%)Average CPM:5.12
pancreasBreadth of expression: 1 out of  20 libraries express this gene (5.00%)Average CPM:0.70
placentaBreadth of expression: 2 out of  358 libraries express this gene (0.56%)Average CPM:1212.12
skinBreadth of expression: 2 out of  38 libraries express this gene (5.26%)Average CPM:5.57
testisBreadth of expression: 1 out of  180 libraries express this gene (0.56%)Average CPM:1.05
uncharacterized tissueBreadth of expression: 5 out of  1739 libraries express this gene (0.29%)Average CPM:0.62
uterusBreadth of expression: 1 out of  236 libraries express this gene (0.42%)Average CPM:0.45
whole bodyBreadth of expression: 1 out of  12 libraries express this gene (8.33%)Average CPM:27.80
SAGE (1630854 tags, 31 libraries)
Tissue Breadth ? CPM ?
brainBreadth of expression: 10 out of  30 libraries express this gene (33.33%)Average CPM:24.56
colonBreadth of expression: 3 out of  8 libraries express this gene (37.50%)Average CPM:19.22
eyeBreadth of expression: 1 out of  6 libraries express this gene (16.67%)Average CPM:18.63
foreskinBreadth of expression: 1 out of  2 libraries express this gene (50.00%)Average CPM:105.30
mammary glandBreadth of expression: 2 out of  20 libraries express this gene (10.00%)Average CPM:79.48
ovaryBreadth of expression: 1 out of  10 libraries express this gene (10.00%)Average CPM:61.75
prostateBreadth of expression: 2 out of  14 libraries express this gene (14.29%)Average CPM:33.97
skinBreadth of expression: 1 out of  7 libraries express this gene (14.29%)Average CPM:44.51
uncharacterized tissueBreadth of expression: 7 out of  20 libraries express this gene (35.00%)Average CPM:25.29
vascularBreadth of expression: 1 out of  3 libraries express this gene (33.33%)Average CPM:19.02
EvidenceDeletion in System Syndrom with Kidney Involvment

Other key publications related to this gene


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Department of Urology
University of California, San Francisco