PGDB (v.1.1);
Nov 30, 2002
What's new in this update:
- Included genes involved in the molecular event of apoptosis
in the prostate.
- Included more prostate-specific genes derived from SAGE and
EST expression analysis. In Version 1.0, for gene or ESTs to be included the
the database, they must express exclusively in the prostate and have at
least 5 member EST or SAGE tags derived from prostate libraries. In this update,
this number was lowered to 2.
- More annotations were added to each gene such as Reference
Sequence from GenBank, links to Ensembl and UCSC genome map
Statistic Data
1. Literature
Coverage
January 1st, 1970 - Nov 30, 2002
2. Total number of non-redundant
genes and references in PGDB.
3. Number of genes and
supporting references by category in PGDB.
|
Category
|
Number
of genes
|
Supporting
references
|
|
Category by molecular
event
|
|
|
|
|
Amplification
|
|
|
|
|
|
Prostate cancer
|
16
|
45
|
|
|
Apoptosis
|
|
|
|
|
|
BPH
|
2
|
2
|
|
|
|
Prostate cancer
|
58
|
136
|
|
|
|
Normal prostate
|
1
|
1
|
|
|
Mutation
|
|
|
|
|
|
BPH*
|
3
|
5
|
|
|
|
Prostate cancer
|
49
|
190
|
|
|
Gross deletion
|
|
|
|
|
|
Prostate cancer
|
24
|
32
|
|
|
Methylation
|
|
|
|
|
|
BPH
|
1
|
2
|
|
|
|
Prostate cancer
|
27
|
69
|
|
|
Polymorphism
|
|
|
|
|
|
BPH
|
3
|
3
|
|
|
|
Prostate cancer
|
28
|
94
|
|
|
|
Prostatitis
|
3
|
3
|
|
|
Over
expression
|
|
|
|
|
|
Normal prostate
|
3
|
3
|
|
|
|
Prostate cancer
|
11
|
12
|
|
|
Linkage
Prostate cancer
Misc. Events**
|
|
|
|
5
|
23
|
|
|
|
Normal prostate
|
3
|
2
|
|
|
|
Prostate cancer
|
11
|
10
|
|
Category by expression
|
|
|
|
|
Prostate specific gene
by EST
|
285
|
-
|
|
|
Prostate specific gene
by SAGE
|
62
|
-
|
|
|
|
|
* Begin prostatic
hypertrophy; ** Prostate related genes as identified by other methods such as
data mining
4. Number of references by year and
by molecular or genetic event.
